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Orthohantavirus

Orthohantavirus ( Latin , previously Hantavirus ) is a genus of human and animal viruses from the monotypic Hantaviridae (Hantavirus) family of the order Bunyavirales . Spherical virions ranging in size from 80 to 140 nm are covered with a lipid envelope. The type strain was first described in 1978. As members of the Bunyavirales order, Orthohantavirus has a threefold fragmented genome of negative-polarity single-stranded RNA . A large genome segment encodes RNA-dependent RNA polymerase ( replicase ), the middle one - two glycoproteins of the outer membrane of the virus, and the small one - a nucleocapsid protein. Infection with Hantaviruses in Europe and Asia manifests itself in a mild form of hemorrhagic fever with renal syndrome , although in recent years deaths have been reported in patients with the Dobrava-Belgrade virus ( Dobrava-Belgrade orthohantavirus ), of which four cases were recorded in 2009 in the Krasnodar Territory [2] .

Orthohantavirus
Sin Nombre hanta virus TEM PHIL 1136 lores.jpg
Electron micrograph
Shin Nombre virus
Scientific classification
Domain:Viruses [1]
Realm:Riboviria
Type of:Negarnaviricota
Subtype :Polyploviricotina
Class:Ellioviricetes
Order:Bunyavirales
Family:Hantaviridae
Rod:Orthohantavirus
International Scientific Name

Orthohantavirus

Baltimore Group

V: (-) ssRNA viruses

Hantavirus Infections
ICD-10B 33.4
ICD-9079.81
MeshD018778

The names of viruses are assigned in accordance with the tradition of taxonomy for arboviruses and roboviruses - in accordance with the geographic area where it was discovered [3] . Since 2017, in order to avoid confusion in the names of species from one region for the genus Orthohantavirus, the word virus in them has been replaced by orthohantavirus [4] .

Content

Symptoms

Globally, there are two major categories: Hantaviruses of the Old World and Hantaviruses of the New World .

Hemorrhagic Fever with Renal Syndrome

Hemorrhagic fever with renal syndrome (HFRS) is a group of clinically similar diseases caused by different types of hantaviruses in the Old World. Among them are: Hantaan orthohantavirus , Puumala orthohantavirus , Dobrava-Belgrade orthohantavirus and Khabarovsk orthohantavirus [5] . Mortality from this disease averages about 12%.

Hantavirus Cardiopulmonary Syndrome

Hantavirus Cardiopulmonary Syndrome is a similar group of clinically similar diseases that occur in the Americas. This virus group includes such species as Andes orthohantavirus , Laguna Negra orthohantavirus , Rio Segundo virus and Sin Nombre orthohantavirus [6] . The mortality rate of this disease averages up to 36% [7] , although in some cases it reached 60%.

Opening History

The first major collision with hantaviruses is considered to be the outbreak of the disease, known as "Korean hemorrhagic fever." This happened during the Korean War of 1950-1953. Then, more than 3,000 soldiers of the United Nations organization experienced the effects of an unknown agent causing internal bleeding and renal dysfunction. The level of medicine at that time did not allow to determine the cause of the disease, so the virus remained unknown until 1976.

Dr. Lee and Johnson managed to isolate the etiological agent from an ordinary field mouse . The lung tissue of rodents caught showed a specific response to serum in patients with Korean hemorrhagic fever. Later, a comparison was made between the virus strains obtained from the mouse and sick people. In the same year, a study was shown of the relationship between outbreaks of a similar disease in the Soviet Union [5] . Currently, Korean hemorrhagic fever is known as hemorrhagic fever with renal syndrome and has been shown to be caused by Hantaan orthohantavirus .

The outbreak of diseases and the beginning of work on the study of hantaviruses in the United States occurred in 1993 in the Four Corners region of Colorado . A young and physically healthy representative of the Navajo people suddenly felt unwell, began to choke and, despite all the efforts of the doctors, died. The investigation showed that a few days before the incident, the bride of the young man also died from similar symptoms. In just a short period, there were five similar deaths. Researchers at the US Centers for Disease Control and Prevention used a new method for molecular analysis of viruses to determine the source. The virus turned out to be a new, still unknown type of hantaviruses. Subsequently, the virus was named Sin Nombre virus from the Spanish "nameless virus" [8] .

Classification

Views registered on ICTV

Species of the genus have little resemblance to other groups of viruses. The first classification of the genus Hantavirus was proposed in 1987 at a report in the International Committee on Virus Taxonomy (ICTV). In the future, the classification changed due to the expansion and correction of species composition. In 2017, in connection with the description of the order of the Bunyavirales, the genus was divided into the monotypic family Hantaviridae , changed its name to Orthohantavirus [9] and included 41 species in it [4] :

Scientific name of the speciesRepresentativesRussian name [10]Abbreviation
Amga orthohantavirusAmga virus AH301MGAV
Andes orthohantavirusAndes virus Chile-9717869
Bermejo virus [11]
Castelo dos sonhos virus
Lechiguanas virus
Maciel virus [11]
Oran virus
Pergamino virus [11]
Tunari virus [11]
Virus andesANDV
Asama orthohantavirusAsama virus N10Asav
Asikkala orthohantavirusAsikkala virus
CZ / Beskydy / 412/2010 / Sm
ASIV
Bayou orthohantavirusBayou virus louisiana
Catacamas virus
BAYV
Black Creek Canal orthohantavirusBlack creek canal virusBCCV
Bowe orthohantavirusBowé virus VN1512BOWV
Bruges orthohantavirusBruges virus
BE / Vieux-Genappe / TE / 2013/1
BRGV
Cano delgadito orthohantavirusCaño Delgadito virusCADV
Cao Bang orthohantavirusCao Bang virus 3
Lianghe virus
CBNV
Choclo orthohantavirusChoclo virus MSB96073Choklo virusCHOV
Dabieshan orthohantavirusDabieshan virus Yongjia-Nc-58DBSV
Dobrava-Belgrade orthohantavirusDobrava virus
Kurkino virus
Saaremaa virus
Sochi virus
Dobrava-Belgrade virusDOBV
El Moro Canyon orthohantavirusEl Moro Canyon virus
Carrizal virus
Huitzilac virus
ELMCV
Fugong orthohantavirusFugong virus fg10FUSV
Fusong orthohantavirusFusong virus Fusong-Mf-682Fugv
Hantaan orthohantavirus typusHantaan virus 76-118
Amur virus
Soochong virus
Hantaan virusHtnv
Imjin orthohantavirusImjin virus Cixi-Cl-23Mjnv
Jeju orthohantavirusvJeju virus 10-11Jjuv
Kenkeme orthohantavirusKenkeme virus Fuyuan-Sr-326KKMV
Khabarovsk orthohantavirusKhabarovsk virus
Topografov virus
Khav
Laguna Negra orthohantavirusLaguna negra virus
Maripa virus
Rio Mamore virus
Black Lagoon VirusLanv
Laibin orthohantavirusLaibin virus BT20LAIV
Longquan orthohantavirusLongquan virus
Longquan-rs-32
LQUV
Luxi orthohantavirusLuxi virus LX309LUXV
Maporal orthohantavirusMaporal virus HV-9721050MAPV
Montano orthohantavirusMontano virus 104/2006MTNV
Necocli orthohantavirusNecocli virus HV-O0020002NECV
Nova orthohantavirusNova virus 3483 (Te34)Nvav
Oxbow orthohantavirusOxbow virus Ng1453OXBV
Prospect Hill orthohantavirusProspect hill virus
Bloodland Lake virus [11]
PHV
Puumala orthohantavirusPuumala virus
Hokkaido virus
Muju virus
Puumala virusPUUV
Quezon orthohantavirusQuezon virusQZNV
Rockport orthohantavirusRockport virus MSB57412Rkppv
Sangassou orthohantavirusSangassou virusSANGV
Seoul orthohantavirusSeoul virus HR80-39
Gou virus
Virus seoulSEOV
Sin nombre orthohantavirusSin nombre virus
Blue River virus [11]
Monongahela virus [11]
New york virus
Virus Sin NombreSNV
Thailand orthohantavirusThailand virus 741
Anjozorobe virus
Jurong virus
THAIV
Thottapalayam orthohantavirusThottapalayam virusTPMV
Tula orthohantavirusTula virus
Adler virus
Tulv
Yakeshi orthohantavirusYakeshi virus Yakeshi-Si-210YKSV

Species Awaiting Registration at ICTV

Every year the number of open hantaviruses is increasing. They are recognized either by typical strains of new species, or by varieties of other species. As of March 2017, the viruses that may be included in the genus Orthohantavirus are [4] :

  • Altai virus
  • Camp ripley virus
  • Isla Vista virus
  • Jemez springs virus
  • Kilimanjaro virus
  • Muleshoe virus
  • Qian Hu Shan virus
  • Rio segundo virus
  • Shenyang virus
  • Serang virus
  • Uluguru virus
  • Ussuri virus
  • Xinyi virus
  • Xuan Son virus
  • Yuanjiang virus

Vectors

Hantaviruses are roboviruses, that is, their distribution occurs through rodents . In addition, there are cases when the infection occurred after the bite of certain species of insectivorous bats [12] . Different types of viruses have close ties with their carriers, turning them into natural reservoirs . Now there is no exact answer, whether carriers of viruses influence their species formation. Some studies argue that hantaviruses adapt to a new carrier, thereby changing the structure of their RNA, forming new species [13] [14] [15] . Other studies show that the rate of mutation of RNA viruses corresponds to mutations in other viruses with a similar structure, from which it is concluded that the hypothesis of joint development is erroneous [16] [17] .

In most cases, the natural reservoir does not show any signs of disease from the hantavirus “native” by it [18] (an exception is the Puumala virus, which in some cases leads to the death of the carrier [19] ). When infected with alternative types of hantaviruses, adult rodents completely remove it from the body within 25-50 days, but for young individuals, infection is most often fatal [20] .

A study conducted in 2010 in Eurasia, North and South Americas, showed that all types of hantaviruses can be divided into 3 global groups of rodent subfamilies that are their carriers: mouse , field-popping , cotton-fowling [21] .

Transfer to a man

Most often, human infection with hantavirus occurs upon contact with rodents, or their metabolic products (urine, saliva, pulmonary secretions and droppings). Infection often occurs in warm and dry seasons, when people in large numbers go for walks in the forest. The virus enters the human body in various ways [22] :

  • Inhalation of microparticles of the dung along with dust in the air, for example, when it penetrates into abandoned or preserved premises, including barns, garages and warehouses.
  • Drinking urine-contaminated water and food.
  • Direct contact with the carrier (rodent bite) is the lowest probability of transmitting the virus.

Transmission of the disease from person to person is not typical for hantoviruses. Nevertheless, such cases are found, but recorded only in Argentina [23] and Chile [24] .

Diagnostics

Currently, only nucleocapsid protein is used for the serological diagnosis of hantavirus infections. In clinical practice, serodiagnosis in the form of an indirect enzyme-linked immunosorbent assay (ELISA) is widely used for the primary detection of infection and observation of it.

Study of hantaviruses in Russia

The study of hemorrhagic fever with renal syndrome began in Russia more than 70 years ago. The causative agents of this disease are Puumala , Huntaan , Seoul and Dobrava-Belgrade viruses. These include, in addition to pathogenic for humans, also viruses with unspecified epidemiological characteristics. In Russia, at least 8 hantavirus serotypes circulate among small mammals.

The most common natural focal infection in Russia is hantavirus infection in the form of hemorrhagic fever with renal syndrome. According to Rospotrebnadzor in 2006, 7197 cases of its people’s disease were registered in 48 subjects of the Russian Federation, the incidence rate was 5 cases per 100 thousand population, which is less by 1.4% than in 2005, but among children under fourteen years of age the incidence increased 17.3%, the total number of cases in this group is 195; The incidence of hantaviruses is more than 10-100 times greater than the incidence of tick-borne encephalitis , rabies and other common natural focal infections [25] .

Prevention and infection control

At the moment, it is unknown the effective treatment for hantaviruses, except for the relief of symptoms, as well as support for the body's natural immunity. In the case of hantavirus cardiopulmonary syndrome, patients are immediately taken to the hospital and help restore respiratory function using liquid oxygen and mechanical ventilation [26] .

In the case of HFRS, continuous monitoring is established for the patient - taking into account the fluid injected and lost (to prevent dehydration ), Diet No. 4 is established , after which detoxification prophylaxis, antiviral therapy, antioxidant therapy, and prevention and treatment of infectious-toxic shock are carried out [ 27] .

The best way to prevent infection with hantaviruses is to control rodents, since human infection occurs through direct contact with bodily fluids and droppings. It also helps the destruction of rodent nests, the removal of all possible cracks and holes in the house, through which rodents can penetrate inside. Domestic predators such as cats and ferrets can also be a good help in preventing diseases.

During the years of the war in Korea in 1949-1953, the hantavirus infection clearly manifested itself, which made scientists immediately after the discovery of the hantaviruses begin work on the creation of a vaccine. In the early years, it used the traditional antiviral vaccines based on inactivated whole virion materials or attenuated strains, but due to difficulties in obtaining lysates of high titer hantaviruses, unconventional hemorrhagic fever vaccines with renal syndrome also used unconventional vaccines [ what? ] . The most tried and used is the killed Hantavax vaccine, developed by the Institute of Viral Diseases in South Korea. In China, four different vaccines are being analyzed. In Europe, a vaccine based on Puumela virus chimeric particles and recombinant protein based vaccines have been created at the Institute of Medical Virology in Germany [28] [29] . Since the 1990s, the company for the production of bacterial and viral drugs IPVE them. MP Chumakov is developing a vaccine based on the substrate of the brain tissue of Syrian hamsters [30] .

Notes

  1. ↑ Taxonomy of viruses (English) on the website of the International Committee on Virus Taxonomy (ICTV) .
  2. ↑ Klempa B. , Tkachenko E. E. , Dzagurova T. K. , Yunicheva Y. V. , Morozov V. G. , Okulova N. M. , Slyusareva G. P. , Smirnov A. V. , Kruger D. H. Diseases : magazine. - Centers for Disease Control and Prevention , 2008. - April ( no. 14 ). - P. 617-625 . - DOI : 10.3201 / eid1404.071310 . .
  3. ↑ Plusnin A. , Vaheri A. Saaremaa Hantavirus Should Not Be Confused With Its Dangerous Relative, Dobrava Virus (Eng.) // Journal of Clinical Microbiology: Journal. - 2006. - April ( no. 44 ). - P. 1608 . - DOI : 10.1128 / JCM.44.4.1608-1611.2006 . .
  4. 2 1 2 3 In the genus Hantavirus (proposed family of Hantaviridae , proposed order of Bunyavirales ), create 24 new species, abolish 7 species of genus Orthohantavirus ; likewise, rename its constituent species : [ eng ] // ICTVonline. - Code assigned: 2016.023a-cM. - 2016. - P. 8, 14-15.
  5. 2 1 2 Lee H. W. , Lee P. W. , Johnson K. M. Isolation of the Korean Hemorrhagic fever etiologic agent (Eng.) // Transactions of the Royal Society of the Tropical Medicine and Hygiene: Journal. - 1978. - March ( no. 137 ). - P. 298-308 .
  6. ↑ Padula P. J. , Colavecchia S. B. , Martinez V. P. , Gonzalez Della Valle M. O. , Edelstein A. , Miguel S. D. L. , Russi J. , Mora Riquelme J. , Colucci N. , Almiron M. , Rabinovich R. D. Genetic Diversity, Distribution, and Serological Features of Hantavirus Infection in South America (Eng.) // Journal of Clinical Microbiology: Journal. - 2000. - August ( no. 38 ). - P. 3029-3035 .
  7. ↑ Reported Cases of HPS: HPS in the United States (Unc.) . Centers for Disease Control and Prevention (CDC) (April 21, 2014). The appeal date is November 21, 2015.
  8. ↑ Fulhorst C. F. , Monroe M. C. , Salas R. A. , Duno G. , Utrera A. , Ksiazek T. G. , Nichol S. T. , de Manzione N. M. , Tovar D. , Tesh R. B. Isolation, characterization and the newly developed Cano Delgadito virus, a newly American hantavirus (family Bunyaviridae) (English) // Virus Research: Journal. - 1997. - October ( no. 51 ). - P. 159-171 .
  9. ↑ Create a new order, Bunyavirales , to accommodate nine families (eight new, one renamed) constitu thirteen genera : [ eng ] // ICTVonline. - Code assigned: 2016.030a-vM. - 2016. - P. 5, 13.
  10. ↑ List of microorganisms, toxins, equipment and technologies subject to export control : [approved. By Decree of the President of the Russian Federation of August 20, 2007 No. 1083]: official. text: as of June 1, 2016
  11. 2 1 2 3 4 5 6 7 Implementation of non-Latinized binomial species names in the Bunyaviridae : [ eng ] // ICTVonline. - Code assigned: 2015.003aM. - 2015. - P. 3-4.
  12. ↑ Guo , W.P. , Lin.H., D. , Wang, W. , Tian, ​​J.H. , Cong, M.L. , Zhang , H.L. , Wang , M.R. , Zhou, R.H. , Wang , J.B. , Li, M.H. , Xu.J. , Holmes, E.C. , Zhang.Y. insectivores, and rodents (English) // PLoS Pathogens: magazine. - 2013. - February ( no. 9 ). - DOI : 10.1371 / journal.ppat.1003159 . .
  13. ↑ Hughes A. L. , Friedman R. Evolutionary diversification of the protein-coding genes of hantaviruses (Eng.) // Molecular Biology and Evolution : magazine. - Oxford University Press , 2000. - October ( no. 17 ). - P. 1558-1568 .
  14. ↑ Plyusnin A. , Morzunov S. P. Virus evolution and genetic diversity and their rodent hosts (English) // Current Topics in Microbiology and Immunology: Journal. - 2001. - No. 256 . - p . 47-75 .
  15. ↑ Jackson A. P. , Charleston M. A. A cophylogenetic perspective of RNA-virus evolution (Eng.) // Molecular Biology and Evolution : magazine. - Oxford University Press , 2004. - January ( no. 21 ). - P. 45—57 .
  16. ↑ Ramsden C. , Melo F. L. , Figueiredo L. M. , Holmes E. C. , Zanotto P. M. , VGDN Consortium. High rates of molecular evolution in hantaviruses (English) // Molecular Biology and Evolution : magazine. - Oxford University Press , 2008. - July ( no. 25 ). P. 1488-1492 . - DOI : 10.1093 / molbev / msn093 . .
  17. Ams Ramsden C. , Holmes E. C. , Charleston M. A. Hantavirus evolution // Eng. // Molecular Biology and Evolution : magazine. - Oxford University Press , 2009. - January ( no. 26 ). - P. 143-153 . - DOI : 10.1093 / molbev / msn234 . .
  18. ↑ B. Fieldis , D. Nype. Virology. - M .: Mir, 1989. - T. 1. - p. 272-273. - ISBN 5-03-000283-9 . .
  19. ↑ Kallio ER, Voutilainen L., Vapalahti O., Vaheri A., Henttonen H., Koskela E., Mappes T. Endemic ta ro surv surv - 2007. - August ( vol. 88 , no. 8 ). - P. 1911-1916 . - DOI : 10.1890 / 06-1620.1 . - PMID 17824420 . . PMID 17824420 .
  20. ↑ Schountz, T. , Quackenbuch, S. , Rovnak, J. , Haddock, E. , Black, W. C. IV , Feldman, H. , Prescott, J. Differential Lymphocyte and Antibody Responses in Hantavirus or Andes Hantavirus (English) // Journal of Virology: Journal. - 2014. - August ( no. 88 ). - P. 8319-8331 .
  21. ↑ Jonsson CB , Figueiredo LT , Vapalahti O. A Global Perspective on Environmental, Epidemiology, and Disease (Eng.) // Clinical Microbiology Reviews: Journal. - 2010. - April ( no. 23 ). - P. 412—441 . - DOI : 10.1128 / CMR.00062-09 . .
  22. ↑ How People Get Hantavirus Pulmonary Syndrome (HPS) (English) . Cdc.gov. The appeal date is November 24, 2015.
  23. Ula Padula P. J. , Edelstein A. , Miguel S. D. , López N. M. , Rossi C. M. , Rabinovich R. D. Hantavirus pulmonary syndrome outbreak in Argentina: English Virology: Journal. - 1998. - February ( no. 241 ). - P. 323-330 .
  24. ↑ Toro J. , Vega J. D. , Khan A. S. , Mills J. N. , Padula P. , Terry W. , Yadón Z. , Valderrama R. , Ellis B. A. , Pavletic C. , Cerda R. , Zaki S. , Shieh W. J. , Meyer R . , Tapia M. , Mansilla C. , Baro M. , Vergara J. A. , Concha M. , Calderon G. , Enria D. , Peters C. J. , Ksiazek T. G. An outbreak of hantavirus pulmonary syndrome, Chile, 1997 (eng.) // Virology: magazine. - 1998. - 10–12 ( no. 4 ). - P. 687-694 .
  25. Resolution of the Chief State Sanitary Doctor of the Russian Federation of June 13, 2007 No. 33
  26. ↑ Safronetz D. , Ebihara H. , Feldmann H. , Hooper J. W. The Syrian hamster model of hantavirus pulmonary syndrome (Eng.) // Antiviral Research: Journal. - 2012. - September ( no. 95 ). - P. 282-292 . - DOI : 10.1016 / j.antiviral.2012.06.002 . .
  27. ↑ Khunafina D.Kh., Galiyeva A.T. , Burganova A.N. , Syrtlanova G.R. Hemorrhagic fever with renal syndrome (English) // International Journal of Experimental Education: Journal. - 2010. - No. 12 - P. 31—32 .
  28. Es Maes P. , Clement J. , Van Ranst M. Recent Approaches to Hantavirus Vaccine Development (Eng.) // Emerging Infectious Diseases : magazine. - Centers for Disease Control and Prevention , 2009. - January ( no. 8 ). - p . 67-76 . - DOI : 10.1586 / 14760584.8.1.67 . .
  29. ↑ Schmaljohn C. Vaccines for hantaviruses (Eng.) // Vaccine: Journal. - 2009. - 5 November ( no. 27 ). - P. 61—64 . - DOI : 10.1016 / j.vaccine.2009.07.096 . .
  30. ↑ Vaccines against HFRS // Emergency and Control of Border Viral Diseases, France, Elsevier. 1999, 147-156.
Source - https://ru.wikipedia.org/w/index.php?title=Orthohantavirus&oldid=100713466


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